SRX027353
GSM594600: ChIP-Seq for p300 in ES (129JAE-C57/B6) cells 1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Ep300

Cell type

Cell type Class
Pluripotent stem cell
Cell type
ES cells
NA
NA

Attributes by original data submitter

Sample

source_name
Embyonic stem cells
chip antibody
p300
antibody catalog number
Santa Cruz s.c. 585
cell type
embryonic stem cells

Sequenced DNA Library

library_name
GSM594600: ChIP-Seq for p300 in ES (129JAE-C57/B6) cells 1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
15215665
Reads aligned (%)
72.9
Duplicates removed (%)
11.4
Number of peaks
15887 (qval < 1E-05)

mm9

Number of total reads
15215665
Reads aligned (%)
72.8
Duplicates removed (%)
11.6
Number of peaks
15982 (qval < 1E-05)

Base call quality data from DBCLS SRA