SRX027098
GSM596155: seq-SDQ3891 LEM2 N2 MXemb 1 A EE8 KI021

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
lem-2

Cell type

Cell type Class
Embryo
Cell type
Mixed embryo
NA
NA

Attributes by original data submitter

Sample

source_name
Caenorhabditis elegans_N2_MXemb
strain
N2
Stage
MXemb
chip antibody
LEM2
antibody manufacturer
SDI

Sequenced DNA Library

library_name
GSM596155: seq-SDQ3891_LEM2_N2_MXemb_1_A_EE8_KI021
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

ce10

Number of total reads
10435718
Reads aligned (%)
64.4
Duplicates removed (%)
13.6
Number of peaks
4329 (qval < 1E-05)

ce11

Number of total reads
10435718
Reads aligned (%)
64.4
Duplicates removed (%)
13.6
Number of peaks
4243 (qval < 1E-05)

Base call quality data from DBCLS SRA