SRX026637
GSM585588: Kasumi-1 ETOsc(SantaCruz sc9737 E0106) no

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
RUNX1T1

Cell type

Cell type Class
Blood
Cell type
Kasumi-1
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Acute Myelogenous

Attributes by original data submitter

Sample

source_name
Kasumi-1 (leukemic)
cell type
hematopoietic cell
disease state
leukemic
treatment
no
antibody
ETOsc
antibody vendor
SantaCruz
antibody catalog number
sc9737
antibody lot/batch number
E0106

Sequenced DNA Library

library_name
GSM585588: Kasumi-1_ETOsc(SantaCruz_sc9737_E0106)_no
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
8092659
Reads aligned (%)
92.9
Duplicates removed (%)
5.4
Number of peaks
876 (qval < 1E-05)

hg19

Number of total reads
8092659
Reads aligned (%)
92.4
Duplicates removed (%)
5.9
Number of peaks
970 (qval < 1E-05)

Base call quality data from DBCLS SRA