SRX025466
GSM569795: GFP ChIPSeq 1 and 2

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
GFP

Cell type

Cell type Class
Larvae
Cell type
3rd instar
NA
NA

Attributes by original data submitter

Sample

source_name
10T-W3L
developmental stage
10T-W3L
fraction
ChIP
antibody name
NWG-GFP
manufacturer
White Lab/Chemicon

Sequenced DNA Library

library_name
GSM569795: GFP_ChIPSeq_1 and 2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
58341165
Reads aligned (%)
90.8
Duplicates removed (%)
80.5
Number of peaks
8752 (qval < 1E-05)

dm3

Number of total reads
58341165
Reads aligned (%)
93.6
Duplicates removed (%)
69.5
Number of peaks
0 (qval < 1E-05)

Base call quality data from DBCLS SRA