SRX025463
GSM569792: Sin3A INPUT 1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Embryo
Cell type
0-12h embryos
NA
NA

Attributes by original data submitter

Sample

source_name
E0-12h
developmental stage
E0-12h
fraction
input

Sequenced DNA Library

library_name
GSM569792: Sin3A_INPUT_1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
9053691
Reads aligned (%)
96.2
Duplicates removed (%)
9.0
Number of peaks
687 (qval < 1E-05)

dm3

Number of total reads
9053691
Reads aligned (%)
96.6
Duplicates removed (%)
7.2
Number of peaks
546 (qval < 1E-05)

Base call quality data from DBCLS SRA