Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3Kac

Cell type

Cell type Class
Blood
Cell type
Th2 Cells
MeSH Description
A subset of helper-inducer T-lymphocytes which synthesize and secrete the INTERLEUKINS IL-4; IL-5; IL-6; and IL-10. These cytokines influence B-cell development and antibody production as well as augmenting humoral responses.

Attributes by original data submitter

Sample

source_name
Th2 cells, H3KAc
strain
C57BL/6
tissue
spleen
cell type
Th2
antibody
anti-H3KAc
antibody vendor
Upstate Biotechnology

Sequenced DNA Library

library_name
GSM569203: Th2_H3KAc
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

mm10

Number of total reads
27422386
Reads aligned (%)
91.9
Duplicates removed (%)
9.9
Number of peaks
17416 (qval < 1E-05)

mm9

Number of total reads
27422386
Reads aligned (%)
91.8
Duplicates removed (%)
10.0
Number of peaks
17326 (qval < 1E-05)

Base call quality data from DBCLS SRA