SRX023852
GSM565202: Neuronal polII ChIP Dudek

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
RNA polymerase
Antigen
RNA polymerase II

Cell type

Cell type Class
Embryo
Cell type
Embryonic neurons
NA
NA

Attributes by original data submitter

Sample

source_name
Dissociated primary neurons
strain
Sprague-Dawley
tissue
Neurons obtained from dissociated pre-natal cortices
chip antibody
anti-Rpb1 (M01)
antibody manufacturer
Abgent

Sequenced DNA Library

library_name
GSM565202: Neuronal_polII_ChIP_Dudek
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

rn6

Number of total reads
52702675
Reads aligned (%)
54.9
Duplicates removed (%)
11.3
Number of peaks
4435 (qval < 1E-05)

Base call quality data from DBCLS SRA