SRX023668
GSM566174: H3K9/14Ac HeLa

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K9K14ac

Cell type

Cell type Class
Uterus
Cell type
HeLa
Primary Tissue
Cervix
Tissue Diagnosis
Adenocarcinoma

Attributes by original data submitter

Sample

source_name
Human cervical carcinoma cell line
cell line
HeLa Kyoto cell line
sample type
Antibody H3K9/14Ac from Diagenode (pAb-ACHBHS-044)
antibody
anti-H3K9/14Ac
antibody manufacturer
Diagenode

Sequenced DNA Library

library_name
GSM566174: H3K9/14Ac_HeLa
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
15186316
Reads aligned (%)
97.9
Duplicates removed (%)
16.5
Number of peaks
21495 (qval < 1E-05)

hg19

Number of total reads
15186316
Reads aligned (%)
97.6
Duplicates removed (%)
16.8
Number of peaks
21504 (qval < 1E-05)

Base call quality data from DBCLS SRA