SRX023667
GSM566173: H3K79me3 HeLa

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K79me3

Cell type

Cell type Class
Uterus
Cell type
HeLa
Primary Tissue
Cervix
Tissue Diagnosis
Adenocarcinoma

Attributes by original data submitter

Sample

source_name
Human cervical carcinoma cell line
cell line
HeLa Kyoto cell line
sample type
Antibody H3K79me3 from Abcam (ab2621)
antibody
anti-H3K79me3
antibody manufacturer
Abcam

Sequenced DNA Library

library_name
GSM566173: H3K79me3_HeLa
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
15157458
Reads aligned (%)
98.0
Duplicates removed (%)
10.6
Number of peaks
8285 (qval < 1E-05)

hg19

Number of total reads
15157458
Reads aligned (%)
97.8
Duplicates removed (%)
10.7
Number of peaks
8316 (qval < 1E-05)

Base call quality data from DBCLS SRA