SRX022860
GSM559803: Sin3B MT 4

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Sin3b

Cell type

Cell type Class
Muscle
Cell type
C2C12
Primary Tissue
Skeletal Muscle
Tissue Diagnosis
NOS

Attributes by original data submitter

Sample

source_name
C2C12 myotubes
origin
C2C12 cell line
genetic background
C3H
cell type
myotube
chip antibody
Sin3B
chip antibody manufacturer
Santa Cruz Biotechnology

Sequenced DNA Library

library_name
GSM559803: Sin3B MT 4
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
10617332
Reads aligned (%)
56.8
Duplicates removed (%)
52.3
Number of peaks
511 (qval < 1E-05)

mm9

Number of total reads
10617332
Reads aligned (%)
56.6
Duplicates removed (%)
52.8
Number of peaks
538 (qval < 1E-05)

Base call quality data from DBCLS SRA