SRX022694
GSM560347: ChIP-Seq for Med1 in mES cells

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Med1

Cell type

Cell type Class
Pluripotent stem cell
Cell type
ES cells
NA
NA

Attributes by original data submitter

Sample

source_name
Embyonic stem cells
chip antibody
Med1/TRAP220
antibody catalog number
Bethyl A300-793A
antibody lot number
A300-793A-1
strain
C57BL/6-129
cell type
V6.5 embryonic stem cells

Sequenced DNA Library

library_name
GSM560347: ChIP-Seq for Med1 in mES cells
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
20944820
Reads aligned (%)
75.4
Duplicates removed (%)
34.0
Number of peaks
3307 (qval < 1E-05)

mm9

Number of total reads
20944820
Reads aligned (%)
75.3
Duplicates removed (%)
34.2
Number of peaks
3291 (qval < 1E-05)

Base call quality data from DBCLS SRA