SRX022493
GSM558675: p300 ChIPSeq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Ep300

Cell type

Cell type Class
Pluripotent stem cell
Cell type
ES cells
NA
NA

Attributes by original data submitter

Sample

source_name
mouse ES cells
strain
R1
cell type
ES cells
chip antibody
p300

Sequenced DNA Library

library_name
GSM558675: p300_ChIPSeq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
24078533
Reads aligned (%)
92.5
Duplicates removed (%)
8.7
Number of peaks
1985 (qval < 1E-05)

mm9

Number of total reads
24078533
Reads aligned (%)
92.4
Duplicates removed (%)
8.8
Number of peaks
1430 (qval < 1E-05)

Base call quality data from DBCLS SRA