Antigen

Antigen Class

Input control

Antigen

Input control

Cell type

Cell type Class

Blood

Cell type

Lymphoblastoid cell line

Tissue

blood

Lineage

mesoderm

Description

parental cell type to lymphoblastoid cell lines

Sample

source_name

lymphoblastoid, GM10855, input

biomaterial_provider

GM10855

cell line

GM10855

cell type

lymphoblastoid

sample type

mixture of equal amounts of DNA from samples 01-04

antibody

none

Sequenced DNA Library

library_name

GSM558638: GM10855_Input

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer II

hg38

Number of total reads

15001356

Reads aligned (%)

97.4

Duplicates removed (%)

11.2

Number of peaks

345 (qval < 1E-05)

hg19

Number of total reads

15001356

Reads aligned (%)

88.5

Duplicates removed (%)

6.0

Number of peaks

651 (qval < 1E-05)