SRX021804
Genome-Wide Analysis of ETS Family DNA-Binding in vitro and in vivo

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
No description
Cell type
NA
NA
NA

Attributes by original data submitter

Sample

Sequenced DNA Library

library_name
VCaP_IgG control
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
13128728
Reads aligned (%)
90.3
Duplicates removed (%)
16.5
Number of peaks
204 (qval < 1E-05)

hg19

Number of total reads
13128728
Reads aligned (%)
89.5
Duplicates removed (%)
18.1
Number of peaks
623 (qval < 1E-05)

Base call quality data from DBCLS SRA