SRX021435
GSM545888: ES-EP PU.1 A1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Spi1

Cell type

Cell type Class
Pluripotent stem cell
Cell type
mESC derived haematopoietic progenitor
NA
NA

Attributes by original data submitter

Sample

source_name
ES-cell derived erythroid progenitors
chip antibody
anti-PU.1 (T-21)
antibody vendor
Santa Cruz

Sequenced DNA Library

library_name
GSM545888: ES-EP_PU.1_A1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
3424867
Reads aligned (%)
91.0
Duplicates removed (%)
18.8
Number of peaks
2546 (qval < 1E-05)

mm9

Number of total reads
3424867
Reads aligned (%)
90.7
Duplicates removed (%)
19.7
Number of peaks
2569 (qval < 1E-05)

Base call quality data from DBCLS SRA