SRX020694
DM embyro Stage 9 Digital DNase DS9128 replicate 2

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
DNase-seq
Antigen
DNase-Seq

Cell type

Cell type Class
No description
Cell type
NA
NA
NA

Attributes by original data submitter

Sample

Sequenced DNA Library

library_name
DS9128_9_2
library_strategy
DNase-Hypersensitivity
library_source
GENOMIC
library_selection
DNase

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
64812053
Reads aligned (%)
36.2
Duplicates removed (%)
41.6
Number of peaks
14613 (qval < 1E-05)

dm3

Number of total reads
64812053
Reads aligned (%)
36.4
Duplicates removed (%)
38.3
Number of peaks
17391 (qval < 1E-05)

Base call quality data from DBCLS SRA