SRX019619
GSM535983: m Escell PolII M

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
RNA polymerase
Antigen
RNA polymerase II

Cell type

Cell type Class
Pluripotent stem cell
Cell type
ES cells
NA
NA

Attributes by original data submitter

Sample

source_name
ES cells
cell type
ES cells
cell line
E14 TG2a
age
NA
chip antibody/mbd affinity column
anti-RNA Polymerase II (ab817; Abcam)

Sequenced DNA Library

library_name
GSM535983: m_Escell_PolII_M
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
33931063
Reads aligned (%)
14.5
Duplicates removed (%)
11.0
Number of peaks
16556 (qval < 1E-05)

mm9

Number of total reads
33931063
Reads aligned (%)
14.5
Duplicates removed (%)
11.3
Number of peaks
16565 (qval < 1E-05)

Base call quality data from DBCLS SRA