SRX019389
GSM535767: 3T3L1 t4 H3K36me3

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K36me3

Cell type

Cell type Class
Embryonic fibroblast
Cell type
3T3-L1
Tissue
Embryo
Cell Type
Fibroblast

Attributes by original data submitter

Sample

source_name
3T3-L1
cell type
3T3-L1 adipocytes
chip epitope
H3K36me3
chip antibody
Abcam, Cat# ab9050, Lot# 136353

Sequenced DNA Library

library_name
GSM535767: 3T3L1_t4_H3K36me3
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
15095084
Reads aligned (%)
67.8
Duplicates removed (%)
13.1
Number of peaks
277 (qval < 1E-05)

mm9

Number of total reads
15095084
Reads aligned (%)
67.6
Duplicates removed (%)
13.2
Number of peaks
289 (qval < 1E-05)

Base call quality data from DBCLS SRA