SRX019366
GSM535744: 3T3L1 t1 H3K27ac

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27ac

Cell type

Cell type Class
Embryonic fibroblast
Cell type
3T3-L1
Tissue
Embryo
Cell Type
Fibroblast

Attributes by original data submitter

Sample

source_name
3T3-L1
cell type
3T3-L1 pre-adipocytes
chip epitope
H3K27ac
chip antibody
Abcam, Cat# ab4729, Lot# 31456

Sequenced DNA Library

library_name
GSM535744: 3T3L1_t1_H3K27ac
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
19521042
Reads aligned (%)
57.1
Duplicates removed (%)
23.8
Number of peaks
21697 (qval < 1E-05)

mm9

Number of total reads
19521042
Reads aligned (%)
57.1
Duplicates removed (%)
23.9
Number of peaks
21693 (qval < 1E-05)

Base call quality data from DBCLS SRA