Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
E2f4

Cell type

Cell type Class
Liver
Cell type
Hepatocytes
MeSH Description
The main structural component of the LIVER. They are specialized EPITHELIAL CELLS that are organized into interconnected plates called lobules.

Attributes by original data submitter

Sample

source_name
liver hepatocytes
strain
C57BL/6
sample
hepatocytes
chip antibody
E2F4

Sequenced DNA Library

library_name
GSM427091: E2F4 liver ChIPseq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

mm10

Number of total reads
6855681
Reads aligned (%)
39.5
Duplicates removed (%)
8.9
Number of peaks
4748 (qval < 1E-05)

mm9

Number of total reads
6855681
Reads aligned (%)
39.4
Duplicates removed (%)
9.4
Number of peaks
4788 (qval < 1E-05)

Base call quality data from DBCLS SRA