SRX019001
GSM445803: Cord blood CD4+ 0h

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Blood
Cell type
CD4+ T cells
NA
NA

Attributes by original data submitter

Sample

source_name
human cord blood CD4+ cell, 0h
tissue
cord blood
cell type
CD4+ T cells

Sequenced DNA Library

library_name
GSM445803: Cord blood CD4+_0h
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
5255599
Reads aligned (%)
92.8
Duplicates removed (%)
5.7
Number of peaks
100 (qval < 1E-05)

hg19

Number of total reads
5255599
Reads aligned (%)
91.6
Duplicates removed (%)
6.7
Number of peaks
109 (qval < 1E-05)

Base call quality data from DBCLS SRA