SRX018660
GSM471927: HL1 H3ac ChIPseq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3ac

Cell type

Cell type Class
Cardiovascular
Cell type
HL-1
NA
NA

Attributes by original data submitter

Sample

source_name
mouse cardiomyocytes (HL1-cells)
cell type
cardiomyocytes
cell line
HL-1
antibody
H3ac

Sequenced DNA Library

library_name
GSM471927: HL1_H3ac_ChIPseq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
8364328
Reads aligned (%)
91.5
Duplicates removed (%)
5.8
Number of peaks
10802 (qval < 1E-05)

mm9

Number of total reads
8364328
Reads aligned (%)
91.3
Duplicates removed (%)
6.0
Number of peaks
10811 (qval < 1E-05)

Base call quality data from DBCLS SRA