SRX018659
GSM471926: HL1 Srf ChIPseq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Srf

Cell type

Cell type Class
Cardiovascular
Cell type
HL-1
NA
NA

Attributes by original data submitter

Sample

source_name
mouse cardiomyocytes (HL1-cells)
cell type
cardiomyocytes
cell line
HL-1
antibody
Srf

Sequenced DNA Library

library_name
GSM471926: HL1_Srf_ChIPseq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
6967318
Reads aligned (%)
90.9
Duplicates removed (%)
11.2
Number of peaks
981 (qval < 1E-05)

mm9

Number of total reads
6967318
Reads aligned (%)
90.7
Duplicates removed (%)
11.4
Number of peaks
989 (qval < 1E-05)

Base call quality data from DBCLS SRA