Antigen

Antigen Class

TFs and others

Antigen

RELA

Cell type

Cell type Class

Blood

Cell type

GM19193

Tissue

blood

Lineage

mesoderm

Description

lymphoblastoid, International HapMap Project, Yoruba in Ibadan, Nigera, treatment: Epstein-Barr Virus transformed

Sample

source_name

Lymphoblastoid Cells

biomaterial_provider

GM19193

cell line

GM19193

cell type

Lymphoblastoid cell

treatment

TNF-alpha induced (6h)

chip antibody

NFκB p65 (C-20) rabbit polyclonal antibody

Sequenced DNA Library

library_name

GM19193_NFkB_II_ChIPSeq_Rep1

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer II

hg38

Number of total reads

7750463

Reads aligned (%)

96.1

Duplicates removed (%)

1.4

Number of peaks

1976 (qval < 1E-05)

hg19

Number of total reads

7750463

Reads aligned (%)

95.3

Duplicates removed (%)

2.0

Number of peaks

2064 (qval < 1E-05)