SRX017714
GSM393962: CD4-H4K16ac-HDACi-0h

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H4K16ac

Cell type

Cell type Class
Blood
Cell type
CD4+ T cells
NA
NA

Attributes by original data submitter

Sample

source_name
CD4+ T cell
cell type
CD4+ T cell
antibody
anti-H4K16ac Ab
sirna
n/a
treatment
n/a

Sequenced DNA Library

library_name
CD4-H4K16ac-HDACi-0h
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
8953859
Reads aligned (%)
49.5
Duplicates removed (%)
2.7
Number of peaks
464 (qval < 1E-05)

hg19

Number of total reads
8953859
Reads aligned (%)
49.3
Duplicates removed (%)
2.8
Number of peaks
460 (qval < 1E-05)

Base call quality data from DBCLS SRA