SRX016558
GSM454598: IMR90hTert Input

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Lung
Cell type
IMR-90
Primary Tissue
Lung
Tissue Diagnosis
Normal

Attributes by original data submitter

Sample

source_name
IMR90hTert_Input
cell type
IMR90hTert
antibody
None

Sequenced DNA Library

library_name
IMR90hTert_Input
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
18193117
Reads aligned (%)
46.5
Duplicates removed (%)
50.1
Number of peaks
271 (qval < 1E-05)

hg19

Number of total reads
18193117
Reads aligned (%)
46.0
Duplicates removed (%)
51.5
Number of peaks
369 (qval < 1E-05)

Base call quality data from DBCLS SRA