ChIP-Atlas: SRX016155

Sample information curated by ChIP-Atlas

Antigen

Antigen Class: Input control
Antigen: Input control

Cell type

Cell type Class: Embryo
Cell type: 0-4h embryos
NA: NA

Attributes by original data submitter

Sample

source_name: E0-4h_7T_INPUT_2
development stage: E0-4h
reference: input

Sequenced DNA Library

library_name: E0-4h_7T_INPUT_2
library_strategy: ChIP-Seq
library_source: GENOMIC
library_selection: ChIP

Sequencing Platform

instrument_model: Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads: 12516454
Reads aligned (%): 94.0
Duplicates removed (%): 12.8
Number of peaks: 1707 (qval < 1E-05)

dm3

Number of total reads: 12516454
Reads aligned (%): 94.6
Duplicates removed (%): 11.2
Number of peaks: 936 (qval < 1E-05)

Base call quality data from DBCLS SRA