SRX015833
GSM480164: ES input

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Pluripotent stem cell
Cell type
ES cells
NA
NA

Attributes by original data submitter

Sample

source_name
Embryonic stem cells (total chromatin)
cell line
LF2
chip antibody
none

Sequenced DNA Library

library_name
ES_input
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
34010372
Reads aligned (%)
91.2
Duplicates removed (%)
63.8
Number of peaks
304 (qval < 1E-05)

mm9

Number of total reads
34010372
Reads aligned (%)
91.1
Duplicates removed (%)
63.9
Number of peaks
377 (qval < 1E-05)

Base call quality data from DBCLS SRA