SRX015580
GSM494682: IRF4 bound post IL21 dup, seq 1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Irf4

Cell type

Cell type Class
Blood
Cell type
CD4+ T cells
NA
NA

Attributes by original data submitter

Sample

source_name
murine CD4+ T
genotype/variation
wildtype
antibody
IRF4
stimulation
post IL21

Sequenced DNA Library

library_name
IRF4 bound post IL21 dup, seq 1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
13743538
Reads aligned (%)
33.7
Duplicates removed (%)
10.9
Number of peaks
4435 (qval < 1E-05)

mm9

Number of total reads
13743538
Reads aligned (%)
33.7
Duplicates removed (%)
11.1
Number of peaks
4420 (qval < 1E-05)

Base call quality data from DBCLS SRA