SRX013115
GSM451801: E8-12 CBP ChIPSeq 1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
CBP

Cell type

Cell type Class
Embryo
Cell type
8-12h embryos
NA
NA

Attributes by original data submitter

Sample

source_name
E8-12
development stage
E8-12
antibody
CBP
antibody provider
Dr. Mattias Mannervik in Stockholm University

Sequenced DNA Library

library_name
E8-12_CBP_ChIPSeq_1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
3213218
Reads aligned (%)
95.2
Duplicates removed (%)
9.0
Number of peaks
1496 (qval < 1E-05)

dm3

Number of total reads
3213218
Reads aligned (%)
95.5
Duplicates removed (%)
7.7
Number of peaks
1608 (qval < 1E-05)

Base call quality data from DBCLS SRA