SRX013095
GSM439449: Pupae H3K9Me3 ChIPSeq 1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K9me3

Cell type

Cell type Class
Pupae
Cell type
Pupae
NA
NA

Attributes by original data submitter

Sample

source_name
Pupae
development point
Pupae
antibody
H3K9me3
antibody manufacturer
Abcam
antibody catalog number
ab8898
antibody lot number
422485

Sequenced DNA Library

library_name
Pupae_H3K9Me3_ChIPSeq_1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
4509098
Reads aligned (%)
73.3
Duplicates removed (%)
8.3
Number of peaks
1491 (qval < 1E-05)

dm3

Number of total reads
4509098
Reads aligned (%)
74.7
Duplicates removed (%)
6.0
Number of peaks
897 (qval < 1E-05)

Base call quality data from DBCLS SRA