SRX013094
GSM439448: E0-4 H3K27Me3 ChIPSeq 1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27me3

Cell type

Cell type Class
Embryo
Cell type
0-4h embryos
NA
NA

Attributes by original data submitter

Sample

source_name
E0-4
development point
E0-4
antibody
H3K27me3
antibody manufacturer
Upstate
antibody catalog number
07-449
antibody lot number
DAM1387952

Sequenced DNA Library

library_name
E0-4_H3K27Me3_ChIPSeq_1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
695909
Reads aligned (%)
82.9
Duplicates removed (%)
5.9
Number of peaks
146 (qval < 1E-05)

dm3

Number of total reads
695909
Reads aligned (%)
83.4
Duplicates removed (%)
5.4
Number of peaks
101 (qval < 1E-05)

Base call quality data from DBCLS SRA