SRX013086
GSM439440: L3 H3K27Me3 ChIPSeq 1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27me3

Cell type

Cell type Class
Larvae
Cell type
3rd instar
NA
NA

Attributes by original data submitter

Sample

source_name
L3
development point
L3
antibody
H3K27me3
antibody manufacturer
Upstate
antibody catalog number
07-449
antibody lot number
DAM1387952

Sequenced DNA Library

library_name
L3_H3K27Me3_ChIPSeq_1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
6195165
Reads aligned (%)
83.5
Duplicates removed (%)
9.4
Number of peaks
229 (qval < 1E-05)

dm3

Number of total reads
6195165
Reads aligned (%)
83.7
Duplicates removed (%)
8.5
Number of peaks
265 (qval < 1E-05)

Base call quality data from DBCLS SRA