SRX013059
GSM408994: Pupae CBP ChIPSeq 1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
CBP

Cell type

Cell type Class
Pupae
Cell type
Pupae
NA
NA

Attributes by original data submitter

Sample

source_name
Pupae
tissue/development stage
Pupae
antibody
CBP
antibody provider
Dr. Mattias Mannervik in Stockholm University

Sequenced DNA Library

library_name
Pupae_CBP_ChIPSeq_1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
3633782
Reads aligned (%)
80.8
Duplicates removed (%)
33.3
Number of peaks
1243 (qval < 1E-05)

dm3

Number of total reads
3633782
Reads aligned (%)
81.2
Duplicates removed (%)
32.8
Number of peaks
1227 (qval < 1E-05)

Base call quality data from DBCLS SRA