SRX013049
GSM408984: AdultMale CBP ChIPSeq 1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
CBP

Cell type

Cell type Class
Adult
Cell type
Adult male
NA
NA

Attributes by original data submitter

Sample

source_name
AdultMale
tissue/development stage
AdultMale
antibody
CBP
antibody provider
Dr. Mattias Mannervik in Stockholm University

Sequenced DNA Library

library_name
AdultMale_CBP_ChIPSeq_1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
1936311
Reads aligned (%)
90.6
Duplicates removed (%)
33.0
Number of peaks
2356 (qval < 1E-05)

dm3

Number of total reads
1936311
Reads aligned (%)
90.9
Duplicates removed (%)
32.4
Number of peaks
2323 (qval < 1E-05)

Base call quality data from DBCLS SRA