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Install and launch IGV before selecting data to visualize
For dm3
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For dm6
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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Analyze
For dm3
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For dm6
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For dm3
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For dm6
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: CBP
wikigenes
PDBj
CellType: Adult female
ATCC
MeSH
RIKEN BRC
SRX013047
GSM408982: AdultFemale CBP ChIPSeq 1
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
TFs and others
Antigen
CBP
Cell type
Cell type Class
Adult
Cell type
Adult female
NA
NA
Attributes by original data submitter
Sample
source_name
AdultFemale
tissue/development stage
AdultFemale
antibody
CBP
antibody provider
Dr. Mattias Mannervik in Stockholm University
Sequenced DNA Library
library_name
AdultFemale_CBP_ChIPSeq_1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
Sequencing Platform
instrument_model
Illumina Genome Analyzer
Where can I get the processing logs?
Read processing pipeline
log
dm3
Number of total reads
1488520
Reads aligned (%)
58.2
Duplicates removed (%)
37.1
Number of peaks
1766 (qval < 1E-05)
dm6
Number of total reads
1488520
Reads aligned (%)
57.6
Duplicates removed (%)
37.6
Number of peaks
1888 (qval < 1E-05)
Base call quality data from
DBCLS SRA