SRX013047
GSM408982: AdultFemale CBP ChIPSeq 1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
CBP

Cell type

Cell type Class
Adult
Cell type
Adult female
NA
NA

Attributes by original data submitter

Sample

source_name
AdultFemale
tissue/development stage
AdultFemale
antibody
CBP
antibody provider
Dr. Mattias Mannervik in Stockholm University

Sequenced DNA Library

library_name
AdultFemale_CBP_ChIPSeq_1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

dm3

Number of total reads
1488520
Reads aligned (%)
58.2
Duplicates removed (%)
37.1
Number of peaks
1766 (qval < 1E-05)

dm6

Number of total reads
1488520
Reads aligned (%)
57.6
Duplicates removed (%)
37.6
Number of peaks
1888 (qval < 1E-05)

Base call quality data from DBCLS SRA