ChIP-Atlas: SRX013008

Sample information curated by ChIP-Atlas

Antigen

Antigen Class: Unclassified
Antigen: Unclassified

Cell type

Cell type Class: Larvae
Cell type: 3rd instar
NA: NA

Attributes by original data submitter

Sample

source_name: L3
tissue: L3
reference: input

Sequenced DNA Library

library_name: L3_INPUT
library_strategy: ChIP-Seq
library_source: GENOMIC
library_selection: ChIP

Sequencing Platform

instrument_model: Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads: 2673830
Reads aligned (%): 78.1
Duplicates removed (%): 10.0
Number of peaks: 233 (qval < 1E-05)

dm3

Number of total reads: 2673830
Reads aligned (%): 78.4
Duplicates removed (%): 7.9
Number of peaks: 0 (qval < 1E-05)

Base call quality data from DBCLS SRA