ChIP-Atlas: SRX012413

Sample information curated by ChIP-Atlas

Antigen

Antigen Class: Input control
Antigen: Input control

Cell type

Cell type Class: Unclassified
Cell type: Unclassified
NA: NA

Attributes by original data submitter

Sample

source_name: Normal Mouse IgG ChIP

Sequenced DNA Library

library_name: Normal Mouse IgG ChIP
library_strategy: ChIP-Seq
library_source: GENOMIC
library_selection: ChIP

Sequencing Platform

instrument_model: Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads: 31228741
Reads aligned (%): 90.7
Duplicates removed (%): 5.5
Number of peaks: 435 (qval < 1E-05)

hg19

Number of total reads: 31228741
Reads aligned (%): 90.1
Duplicates removed (%): 6.3
Number of peaks: 406 (qval < 1E-05)

Base call quality data from DBCLS SRA