SRX012300
GSM432724: H3K9me3 zim2 chipSeq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K9me3

Cell type

Cell type Class
Adult
Cell type
Young adult
NA
NA

Attributes by original data submitter

Sample

source_name
synchronized young adult population of mutant strain zim-2(tm574)
strain
zim-2(tm574)
developmental stage
young adult
chip antibody
anti-H3K9me3

Sequenced DNA Library

library_name
H3K9me3 zim2 chipSeq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

ce11

Number of total reads
13402463
Reads aligned (%)
62.5
Duplicates removed (%)
17.6
Number of peaks
197 (qval < 1E-05)

ce10

Number of total reads
13402463
Reads aligned (%)
62.5
Duplicates removed (%)
17.6
Number of peaks
202 (qval < 1E-05)

Base call quality data from DBCLS SRA