Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
TAF2

Cell type

Cell type Class
Pluripotent stem cell
Cell type
hESC H1
NA
NA

Attributes by original data submitter

Sample

source_name
embryonic stem cells
cell line
H1
chip antibody
TAFII

Sequenced DNA Library

library_name
hESC-TAFII-1b
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

hg19

Number of total reads
15215802
Reads aligned (%)
19.4
Duplicates removed (%)
28.4
Number of peaks
416 (qval < 1E-05)

hg38

Number of total reads
15215802
Reads aligned (%)
19.5
Duplicates removed (%)
28.1
Number of peaks
402 (qval < 1E-05)

Base call quality data from DBCLS SRA