SRX006976
no title

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27me3

Cell type

Cell type Class
Pluripotent stem cell
Cell type
ES cells
NA
NA

Attributes by original data submitter

Sample

antibody
H3K27me3 from T. Jenuwein
cell type
ES-cells
strain
129/Ola

Sequenced DNA Library

library_name
H3K27me3_ChIP-Seq_E14_undiff
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
12942610
Reads aligned (%)
61.4
Duplicates removed (%)
18.6
Number of peaks
1890 (qval < 1E-05)

mm9

Number of total reads
12942610
Reads aligned (%)
61.2
Duplicates removed (%)
19.0
Number of peaks
1904 (qval < 1E-05)

Base call quality data from DBCLS SRA