SRX005649
no title

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
RNA polymerase
Antigen
RNA polymerase II

Cell type

Cell type Class
Embryo
Cell type
Embryos
NA
NA

Attributes by original data submitter

Sample

chip antibody
POL II
genotype
pha-4 transgenic
growth stage
embryo
strain
OP37

Sequenced DNA Library

library_name
Pha-4 emb replicate 2 POL II
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

ce11

Number of total reads
5019687
Reads aligned (%)
64.6
Duplicates removed (%)
10.3
Number of peaks
1329 (qval < 1E-05)

ce10

Number of total reads
5019687
Reads aligned (%)
64.6
Duplicates removed (%)
10.3
Number of peaks
1330 (qval < 1E-05)

Base call quality data from DBCLS SRA