SRX003848
no title

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Rnf2

Cell type

Cell type Class
Pluripotent stem cell
Cell type
ES cells
NA
NA

Attributes by original data submitter

Sample

cell type
Embyonic stem cells (V6.5)
chip antibody
RING1B
genotype
129SvJae x C57BL/6

Sequenced DNA Library

library_name
mES_RING1B_ChIPSeq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
7905669
Reads aligned (%)
70.2
Duplicates removed (%)
19.8
Number of peaks
196 (qval < 1E-05)

mm9

Number of total reads
7905669
Reads aligned (%)
69.9
Duplicates removed (%)
20.2
Number of peaks
412 (qval < 1E-05)

Base call quality data from DBCLS SRA