ChIP-Atlas: SRX003818

Sample information curated by ChIP-Atlas

Antigen

Antigen Class: RNA polymerase
Antigen: RNA polymerase II

Cell type

Cell type Class: Unclassified
Cell type: Unclassified
NA: NA

Attributes by original data submitter

Sample

chip antibody: S2 (ab5095)
condition: L1 arrest
strain: wild-type N2
time: 12 hr

Sequenced DNA Library

library_name: 12hr_Starved_S2
library_strategy: ChIP-Seq
library_source: GENOMIC
library_selection: ChIP

Sequencing Platform

instrument_model: Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

ce11

Number of total reads: 15218948
Reads aligned (%): 27.7
Duplicates removed (%): 9.7
Number of peaks: 7876 (qval < 1E-05)

ce10

Number of total reads: 15218948
Reads aligned (%): 27.7
Duplicates removed (%): 9.7
Number of peaks: 7870 (qval < 1E-05)

Base call quality data from DBCLS SRA