SRX003803
no title

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27me3

Cell type

Cell type Class
Embryonic fibroblast
Cell type
MEF
Tissue
Embryonic Fibroblast
Lineage
primaryCells
Description
Mouse Embryonic Fibroblast

Attributes by original data submitter

Sample

cell line
MEFF
chip antibody
H3K27me3
genotype
Thp/+
strain
FVBN
tissue
embryo

Sequenced DNA Library

library_name
MEFF H3K27me3 ChIP-seq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
9363471
Reads aligned (%)
45.5
Duplicates removed (%)
12.6
Number of peaks
8400 (qval < 1E-05)

mm9

Number of total reads
9363471
Reads aligned (%)
45.5
Duplicates removed (%)
12.8
Number of peaks
8404 (qval < 1E-05)

Base call quality data from DBCLS SRA