SRX003797
no title

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27me3

Cell type

Cell type Class
Uterus
Cell type
HeLa
Primary Tissue
Cervix
Tissue Diagnosis
Adenocarcinoma

Attributes by original data submitter

Sample

cell line
HeLa
chip antibody
H3K27me3

Sequenced DNA Library

library_name
HeLa H3K27me3
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
33209387
Reads aligned (%)
48.3
Duplicates removed (%)
4.4
Number of peaks
47 (qval < 1E-05)

hg19

Number of total reads
33209387
Reads aligned (%)
48.1
Duplicates removed (%)
4.7
Number of peaks
45 (qval < 1E-05)

Base call quality data from DBCLS SRA