SRX000584
Illumina sequencing of Mouse Brain genomic fragment library

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
No description
Cell type
NA
NA
NA

Attributes by original data submitter

Sample

Sequenced DNA Library

library_name
Brain_H3K4me3_ChIPSeq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
22234233
Reads aligned (%)
48.5
Duplicates removed (%)
15.2
Number of peaks
18798 (qval < 1E-05)

mm9

Number of total reads
22234233
Reads aligned (%)
48.4
Duplicates removed (%)
15.3
Number of peaks
18855 (qval < 1E-05)

Base call quality data from DBCLS SRA