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For hg38
BigWig
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For hg19
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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For hg38
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For hg19
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For hg38
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For hg19
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: H3K27me3
wikigenes
PDBj
CellType: CD34+
ATCC
MeSH
RIKEN BRC
Variation
TogoVar
ERX690607
Illumina Genome Analyzer II sequencing
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
Histone
Antigen
H3K27me3
Cell type
Cell type Class
Blood
Cell type
CD34+
NA
NA
Attributes by original data submitter
Sample
ENA first public
2017-01-22
ENA last update
2015-01-28
ENA-CHECKLIST
ERC000011
External Id
SAMEA3226080
INSDC center alias
Paul O'Gorman Leukaemia Research Centre
INSDC center name
Paul O'Gorman Leukaemia Research Centre
INSDC first public
2017-01-22T17:02:13Z
INSDC last update
2015-01-28T16:53:59Z
INSDC status
public
Submitter Id
LPC3 H3K27me3
cell type
CD34+CD38+
common name
human
modification
H3K27me3 ChIP
sample
CML3
sample name
LPC3 H3K27me3
Sequenced DNA Library
library_name
unspecified
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
Sequencing Platform
instrument_model
Illumina Genome Analyzer II
Where can I get the processing logs?
Read processing pipeline
log
hg38
Number of total reads
33059304
Reads aligned (%)
85.4
Duplicates removed (%)
7.4
Number of peaks
15114 (qval < 1E-05)
hg19
Number of total reads
33059304
Reads aligned (%)
85.1
Duplicates removed (%)
8.0
Number of peaks
15037 (qval < 1E-05)
Base call quality data from
DBCLS SRA