Antigen

Antigen Class

No description

Antigen

NA

Cell type

Cell type Class

Neural

Cell type

Brain

MeSH Description

The part of CENTRAL NERVOUS SYSTEM that is contained within the skull (CRANIUM). Arising from the NEURAL TUBE, the embryonic brain is comprised of three major parts including PROSENCEPHALON (the forebrain); MESENCEPHALON (the midbrain); and RHOMBENCEPHALON (the hindbrain). The developed brain consists of CEREBRUM; CEREBELLUM; and other structures in the BRAIN STEM.

Sample

ArrayExpress-Age

10 weeks

ArrayExpress-CellType

Brain Tissue mainly neuronal

ArrayExpress-DevelopmentalStage

Adult

ArrayExpress-Genotype

Wildtype

ArrayExpress-OrganismPart

Brain

ArrayExpress-Phenotype

wildtype

ArrayExpress-Sex

male

ArrayExpress-Species

Mus musculus

ENA first public

2014-10-28

ENA last update

2018-03-08

ENA-CHECKLIST

ERC000011

External Id

SAMEA2618377

INSDC center alias

SC

INSDC center name

Wellcome Sanger Institute

INSDC first public

2014-10-28T09:27:19Z

INSDC last update

2018-03-08T18:13:45Z

INSDC status

public

Submitter Id

m_mC_COR_2-sc-2002013

common name

house mouse

sample description

gDNA from cortex BS treated replicate 2

sample name

m_mC_COR_2-sc-2002013

strain

Bl6

Sequenced DNA Library

library_name

10696730

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

qPCR only

Sequencing Platform

instrument_model

Illumina HiSeq 2000

mm10

Number of total reads

84938723

Reads aligned (%)

3.4

Duplicates removed (%)

5.5

Number of peaks

1304 (qval < 1E-05)

mm9

Number of total reads

84938723

Reads aligned (%)

3.4

Duplicates removed (%)

5.0

Number of peaks

1303 (qval < 1E-05)