Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Pluripotent stem cell
Cell type
ES cells
NA
NA

Attributes by original data submitter

Sample

ENA-CHECKLIST
ERC000011
ENA-FIRST-PUBLIC
2015-06-30T17:01:04Z
ENA-LAST-UPDATE
2018-03-08T18:24:58Z
External Id
SAMEA2594041
INSDC center name
National Research Center for Epigenome Reprogramming Network
INSDC first public
2015-06-30T17:01:04Z
INSDC last update
2018-03-08T18:24:58Z
INSDC status
public
Submitter Id
E-MTAB-2002_AddSamples:cell_culture_1
broker name
ArrayExpress
cell type
mouse embryonic stem cell
common name
house mouse
sample name
E-MTAB-2002_AddSamples:cell_culture_1
scientific_name
Mus musculus
specimen with known storage state
fresh specimen

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

mm10

Number of total reads
18314202
Reads aligned (%)
97.7
Duplicates removed (%)
15.0
Number of peaks
553 (qval < 1E-05)

mm9

Number of total reads
18314202
Reads aligned (%)
97.4
Duplicates removed (%)
15.0
Number of peaks
582 (qval < 1E-05)

Base call quality data from DBCLS SRA